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server: Fix metadata-only deposit which are currently rejected

Antoine R. Dumont requested to merge generated-differential-D4742-source into generated-differential-D4742-target

Otherwise, a check task is scheduled for checks and current metadata-only deposit are rejected with a "Deposit without archive is rejected" message.

Which in this case is not correct.

Related to #2886 (closed)

Test Plan

tox

Migrated from D4742 (view on Phabricator)

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