app_manager: Use more efficient uv cli instead of pip

It's a proposal out of nico's yesterday remark on making that step faster. It's not looking up the cache part.

It's more efficient and faster for computing the requirements (twice as fast with the graph deps) [1] vs [2]

Docker layers were already cached so the time comparison is viable.

Also, I've only focused on the frozen requirements step proposal. I've failed to make it work on other container Dockerfile (since uv wants to work on venv and we don't have any there).

Note that the requirements-frozen.txt generated by uv is slightly different (while still compatible afaict) [3]

[1] Generate frozen requirements with pip in ~22s total

tony@kessel:~/work/inria/repo/swh/sysadm-environment/swh-apps (master) $ time docker run --rm -v $(pwd):/src app-manager generate-frozen-requirements swh-graph
Requirement already satisfied: pip in /tmp/swh-graphzwxbv4a7/lib/python3.10/site-packages (23.0.1)
Collecting pip
  Using cached pip-24.3.1-py3-none-any.whl (1.8 MB)
Requirement already satisfied: setuptools in /tmp/swh-graphzwxbv4a7/lib/python3.10/site-packages (65.5.0)
Collecting setuptools
  Using cached setuptools-75.3.0-py3-none-any.whl (1.3 MB)
Collecting wheel
  Downloading wheel-0.44.0-py3-none-any.whl (67 kB)
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Installing collected packages: wheel, setuptools, pip
  Attempting uninstall: setuptools
    Found existing installation: setuptools 65.5.0
    Uninstalling setuptools-65.5.0:
      Successfully uninstalled setuptools-65.5.0
  Attempting uninstall: pip
    Found existing installation: pip 23.0.1
    Uninstalling pip-23.0.1:
      Successfully uninstalled pip-23.0.1
Successfully installed pip-24.3.1 setuptools-75.3.0 wheel-0.44.0
Collecting swh.graph (from -r /src/apps/swh-graph/requirements.txt (line 1))
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Collecting python-json-logger (from -r /src/apps/swh-graph/requirements.txt (line 2))
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INFO: pip is looking at multiple versions of grpcio-tools to determine which version is compatible with other requirements. This could take a while.
Collecting grpcio-tools (from swh.graph->-r /src/apps/swh-graph/requirements.txt (line 1))
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INFO: pip is still looking at multiple versions of grpcio-tools to determine which version is compatible with other requirements. This could take a while.
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INFO: This is taking longer than usual. You might need to provide the dependency resolver with stricter constraints to reduce runtime. See https://pip.pypa.io/warnings/backtracking for guidance. If you want to abort this run, press Ctrl + C.
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Requirement already satisfied: setuptools in /tmp/swh-graphzwxbv4a7/lib/python3.10/site-packages (from grpcio-tools->swh.graph->-r /src/apps/swh-graph/requirements.txt (line 1)) (75.3.0)
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Collecting packaging (from gunicorn->aiohttp-utils>=3.1.1->swh.core[http]>=0.3->swh.graph->-r /src/apps/swh-graph/requirements.txt (line 1))
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Collecting cffi (from swh.perfecthash>=1.3.0->swh.objstorage>=2.2.0->swh.storage>=2.3.1->swh.dataset->swh.graph->-r /src/apps/swh-graph/requirements.txt (line 1))
  Downloading cffi-1.17.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting pycparser (from cffi->swh.perfecthash>=1.3.0->swh.objstorage>=2.2.0->swh.storage>=2.3.1->swh.dataset->swh.graph->-r /src/apps/swh-graph/requirements.txt (line 1))
  Downloading pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Downloading swh.graph-6.1.0-py3-none-any.whl (183 kB)
Downloading python_json_logger-2.0.7-py3-none-any.whl (8.1 kB)
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Downloading swh.model-6.16.0-py3-none-any.whl (149 kB)
Downloading aiohttp-3.10.10-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (1.2 MB)
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Downloading boto3-1.35.54-py3-none-any.whl (139 kB)
Using cached click-8.1.7-py3-none-any.whl (97 kB)
Downloading grpcio_tools-1.62.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.8 MB)
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Downloading psutil-6.1.0-cp36-abi3-manylinux_2_12_x86_64.manylinux2010_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (287 kB)
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Downloading frozenlist-1.5.0-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (241 kB)
Downloading grpcio-1.67.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (5.9 MB)
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Downloading python_magic-0.4.27-py2.py3-none-any.whl (13 kB)
Using cached PyYAML-6.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (751 kB)
Downloading requests-2.32.3-py3-none-any.whl (64 kB)
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Downloading certifi-2024.8.30-py3-none-any.whl (167 kB)
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Downloading exceptiongroup-1.2.2-py3-none-any.whl (16 kB)
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Downloading sortedcontainers-2.4.0-py2.py3-none-any.whl (29 kB)
Downloading swh.counters-0.11.0-py3-none-any.whl (37 kB)
Downloading swh.objstorage-3.3.0-py3-none-any.whl (125 kB)
Using cached urllib3-2.2.3-py3-none-any.whl (126 kB)
Downloading werkzeug-3.1.2-py3-none-any.whl (224 kB)
Downloading wrapt-1.16.0-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Downloading gunicorn-23.0.0-py3-none-any.whl (85 kB)
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Downloading MarkupSafe-3.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (20 kB)
Downloading swh.perfecthash-1.3.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (259 kB)
Downloading packaging-24.1-py3-none-any.whl (53 kB)
Downloading cffi-1.17.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (446 kB)
Downloading pycparser-2.22-py3-none-any.whl (117 kB)
Building wheels for collected packages: psycopg2
  Building wheel for psycopg2 (setup.py): started
  Building wheel for psycopg2 (setup.py): finished with status 'done'
  Created wheel for psycopg2: filename=psycopg2-2.9.10-cp310-cp310-linux_x86_64.whl size=479773 sha256=acb2030b880b2f622f4c937004d3bc04fc031f874e28485fa3cf9d100e3434ec
  Stored in directory: /opt/swh/.cache/pip/wheels/51/41/e0/2912ad51b01f454d26dfb26e5cc5923874656749b9e83943a8
Successfully built psycopg2
Installing collected packages: sortedcontainers, py4j, plyvel, confluent-kafka, wrapt, urllib3, typing-extensions, types-protobuf, tqdm, tenacity, six, pyyaml, python-mimeparse, python-magic, python-json-logger, pyorc, pycparser, psycopg2, psutil, protobuf, propcache, packaging, mypy-extensions, msgpack, MarkupSafe, jmespath, itsdangerous, iso8601, idna, grpcio, frozenlist, exceptiongroup, click, charset-normalizer, certifi, blinker, backports.entry-points-selectable, attrs, async-timeout, aiohappyeyeballs, Werkzeug, types-requests, sentry-sdk, requests, redis, python-dateutil, mypy-protobuf, multidict, Jinja2, hypothesis, gunicorn, grpcio-tools, geomet, deprecated, cffi, attrs-strict, aiosignal, yarl, swh.perfecthash, swh.model, swh.core, flask, cassandra-driver, botocore, swh.journal, s3transfer, aiohttp, boto3, aiohttp-utils, swh.objstorage, swh.counters, swh.storage, swh.dataset, swh.graph
Successfully installed Jinja2-3.1.4 MarkupSafe-3.0.2 Werkzeug-3.1.2 aiohappyeyeballs-2.4.3 aiohttp-3.10.10 aiohttp-utils-3.2.1 aiosignal-1.3.1 async-timeout-4.0.3 attrs-24.2.0 attrs-strict-1.0.1 backports.entry-points-selectable-1.3.0 blinker-1.8.2 boto3-1.35.54 botocore-1.35.54 cassandra-driver-3.29.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 click-8.1.7 confluent-kafka-2.6.0 deprecated-1.2.14 exceptiongroup-1.2.2 flask-3.0.3 frozenlist-1.5.0 geomet-0.2.1.post1 grpcio-1.67.1 grpcio-tools-1.62.3 gunicorn-23.0.0 hypothesis-6.116.0 idna-3.10 iso8601-2.1.0 itsdangerous-2.2.0 jmespath-1.0.1 msgpack-1.1.0 multidict-6.1.0 mypy-extensions-1.0.0 mypy-protobuf-3.2.0 packaging-24.1 plyvel-1.5.1 propcache-0.2.0 protobuf-4.25.5 psutil-6.1.0 psycopg2-2.9.10 py4j-0.10.9.7 pycparser-2.22 pyorc-0.9.0 python-dateutil-2.9.0.post0 python-json-logger-2.0.7 python-magic-0.4.27 python-mimeparse-2.0.0 pyyaml-6.0.2 redis-5.2.0 requests-2.32.3 s3transfer-0.10.3 sentry-sdk-2.18.0 six-1.16.0 sortedcontainers-2.4.0 swh.core-3.6.2 swh.counters-0.11.0 swh.dataset-1.7.0 swh.graph-6.1.0 swh.journal-1.5.2 swh.model-6.16.0 swh.objstorage-3.3.0 swh.perfecthash-1.3.2 swh.storage-2.8.1 tenacity-9.0.0 tqdm-4.66.6 types-protobuf-5.28.3.20241030 types-requests-2.32.0.20241016 typing-extensions-4.12.2 urllib3-2.2.3 wrapt-1.16.0 yarl-1.17.1
docker run --rm -v $(pwd):/src app-manager generate-frozen-requirements
0.03s user 0.02s system 0% cpu 21.970 total

[2] Generating frozen requirements with uv in ~10.5s total

tony@kessel:~/work/inria/repo/swh/sysadm-environment/swh-apps (master) $ time docker run --rm -v $(pwd):/src app-manager generate-frozen-requirements swh-graph
Collecting uv
  Downloading uv-0.4.30-py3-none-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (14.0 MB)
     ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 14.0/14.0 MB 80.5 MB/s eta 0:00:00
Installing collected packages: uv
Successfully installed uv-0.4.30

[notice] A new release of pip is available: 23.0.1 -> 24.3.1
[notice] To update, run: python3 -m pip install --upgrade pip
Using Python 3.10.15 environment at /tmp/swh-graphaf177vlv
Resolved 3 packages in 52ms
Prepared 3 packages in 61ms
Uninstalled 2 packages in 57ms
Installed 3 packages in 31ms
 - pip==23.0.1
 + pip==24.3.1
 - setuptools==65.5.0
 + setuptools==75.3.0
 + wheel==0.44.0
Using Python 3.10.15 environment at /tmp/swh-graphaf177vlv
Resolved 75 packages in 448ms
Prepared 74 packages in 4.49s
Installed 74 packages in 127ms
 + aiohappyeyeballs==2.4.3
 + aiohttp==3.10.10
 + aiohttp-utils==3.2.1
 + aiosignal==1.3.1
 + async-timeout==4.0.3
 + attrs==24.2.0
 + attrs-strict==1.0.1
 + backports-entry-points-selectable==1.3.0
 + blinker==1.8.2
 + boto3==1.35.54
 + botocore==1.35.54
 + cassandra-driver==3.29.2
 + certifi==2024.8.30
 + cffi==1.17.1
 + charset-normalizer==3.4.0
 + click==8.1.7
 + confluent-kafka==2.6.0
 + deprecated==1.2.14
 + exceptiongroup==1.2.2
 + flask==3.0.3
 + frozenlist==1.5.0
 + geomet==0.2.1.post1
 + grpcio==1.67.1
 + grpcio-tools==1.62.3
 + gunicorn==23.0.0
 + hypothesis==6.116.0
 + idna==3.10
 + iso8601==2.1.0
 + itsdangerous==2.2.0
 + jinja2==3.1.4
 + jmespath==1.0.1
 + markupsafe==3.0.2
 + msgpack==1.1.0
 + multidict==6.1.0
 + mypy-extensions==1.0.0
 + mypy-protobuf==3.2.0
 + packaging==24.1
 + plyvel==1.5.1
 + propcache==0.2.0
 + protobuf==4.25.5
 + psutil==6.1.0
 + psycopg2==2.9.10
 + py4j==0.10.9.7
 + pycparser==2.22
 + pyorc==0.9.0
 + python-dateutil==2.9.0.post0
 + python-json-logger==2.0.7
 + python-magic==0.4.27
 + python-mimeparse==2.0.0
 + pyyaml==6.0.2
 + redis==5.2.0
 + requests==2.32.3
 + s3transfer==0.10.3
 + sentry-sdk==2.18.0
 + six==1.16.0
 + sortedcontainers==2.4.0
 + swh-core==3.6.2
 + swh-counters==0.11.0
 + swh-dataset==1.7.0
 + swh-graph==6.1.0
 + swh-journal==1.5.2
 + swh-model==6.16.0
 + swh-objstorage==3.3.0
 + swh-perfecthash==1.3.2
 + swh-storage==2.8.1
 + tenacity==9.0.0
 + tqdm==4.66.6
 + types-protobuf==5.28.3.20241030
 + types-requests==2.32.0.20241016
 + typing-extensions==4.12.2
 + urllib3==2.2.3
 + werkzeug==3.1.2
 + wrapt==1.16.0
 + yarl==1.17.1
docker run --rm -v $(pwd):/src app-manager generate-frozen-requirements
0.02s user 0.01s system 0% cpu 10.447 total

[3] requirement-frozen.txt from pip vs the one from uv

$ diff requirements-frozen.txt apps/swh-graph/requirements-frozen.txt
8c8
< backports.entry-points-selectable==1.3.0
---
> backports-entry-points-selectable==1.3.0
18c18
< Deprecated==1.2.14
---
> deprecated==1.2.14
20c20
< Flask==3.0.3
---
> flask==3.0.3
30c30
< Jinja2==3.1.4
---
> jinja2==3.1.4
32c32
< MarkupSafe==3.0.2
---
> markupsafe==3.0.2
37a38
> pip==24.3.1
50c51
< PyYAML==6.0.2
---
> pyyaml==6.0.2
54a56
> setuptools==75.3.0
57,65c59,67
< swh.core==3.6.2
< swh.counters==0.11.0
< swh.dataset==1.7.0
< swh.graph==6.1.0
< swh.journal==1.5.2
< swh.model==6.16.0
< swh.objstorage==3.3.0
< swh.perfecthash==1.3.2
< swh.storage==2.8.1
---
> swh-core==3.6.2
> swh-counters==0.11.0
> swh-dataset==1.7.0
> swh-graph==6.1.0
> swh-journal==1.5.2
> swh-model==6.16.0
> swh-objstorage==3.3.0
> swh-perfecthash==1.3.2
> swh-storage==2.8.1
70c72
< typing_extensions==4.12.2
---
> typing-extensions==4.12.2
72c74,76
< Werkzeug==3.1.2
---
> uv==0.4.30
> werkzeug==3.1.2
> wheel==0.44.0