pre-commit: Update pre-commit and hooks

That just failed to work with previous versions with unclear reason.

```
pre-commit installed at .git/hooks/pre-commit
[INFO] Installing environment for https://github.com/PyCQA/isort.
[INFO] Once installed this environment will be reused.
[INFO] This may take a few minutes...
An unexpected error has occurred: CalledProcessError: command: ('/home/tony/.cache/pre-commit/repo3afnie1n/py_env-python3/bin/python', '-mpip', 'install', '.')
return code: 1
...
          RuntimeError: The Poetry configuration is invalid:
            - data.extras.pipfile_deprecated_finder[2] must match pattern
            ^[a-zA-Z-_.0-9]+$
```

.pre-commit-config.yaml

 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.3.0
+    rev: v4.6.0
     hooks:
       - id: trailing-whitespace
       - id: check-json
       - id: check-yaml
 
   - repo: https://github.com/pycqa/flake8
-    rev: 5.0.4
+    rev: 7.1.0
     hooks:
       - id: flake8
         additional_dependencies: [flake8-bugbear==22.9.23]
 
   - repo: https://github.com/codespell-project/codespell
-    rev: v2.2.2
+    rev: v2.3.0
     hooks:
       - id: codespell
         name: Check source code spelling
@@ -30,11 +30,11 @@ repos:
         types: [python]
 
   - repo: https://github.com/PyCQA/isort
-    rev: 5.10.1
+    rev: 5.13.2
     hooks:
       - id: isort
 
   - repo: https://github.com/python/black
-    rev: 22.10.0
+    rev: 24.4.2
     hooks:
       - id: black