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deposit: add request duration on access logs

Related to T2787

Test Plan

diff origin/production/moma.softwareheritage.org current/moma.softwareheritage.org
*******************************************
  Apache::Vhost[deposit.softwareheritage.org_non-ssl] =>
   parameters =>
     access_log_format =>
      - false
      + combined_with_duration
*******************************************
  Concat::Fragment[deposit.softwareheritage.org_non-ssl-access_log] =>
   parameters =>
     content =>
      -   CustomLog "/var/log/apache2/deposit.softwareheritage.org_non-ssl_access.log" combined_
      +   CustomLog "/var/log/apache2/deposit.softwareheritage.org_non-ssl_access.log" "combined_with_duration"_
*******************************************
  Concat_fragment[deposit.softwareheritage.org_non-ssl-access_log] =>
   parameters =>
     content =>
      -   CustomLog "/var/log/apache2/deposit.softwareheritage.org_non-ssl_access.log" combined_
      +   CustomLog "/var/log/apache2/deposit.softwareheritage.org_non-ssl_access.log" "combined_with_duration"_
*******************************************
*** End octocatalog-diff on moma.softwareheritage.org

Migrated from D5000 (view on Phabricator)

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