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backfill: Add missing raw_manifest to directories

vlorentz requested to merge generated-differential-D7359-source into generated-differential-D7359-target

This was not covered by tests so far, because swh.model.tests.swh_model_data.TEST_OBJECTS did not contain any object with a raw_manifest.

But it will in swh-model > 5.0.0 (thanks to swh-model!223 (closed))

Migrated from D7359 (view on Phabricator)

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