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Add tests and fix behavior of scanner cli

  • add smoke and unit tests for cli to have maximum coverage
  • fix behavior of cli in case an invalid config file is specified via envvar
  • rename scan to do_scan in scanner
  • fix not self-contained temp_path fixture in conftest

Need advice on whether to use a real (tree that exist in the archive) root_path for the tests, here do_scan is mocked and never actually called.

Follow-up to !31 (closed).

Related to !31 (closed), D4130


Migrated from D4089 (view on Phabricator)

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